Image Gallery

We use Plotly as our backend for visualisation. It provides excellent graph interactivity in Jupyter notebooks.

Annotations

Sequence Features

Annotation DB Features

Alignments & Sequences

Sequence logos

Information analysis of an alignment

Counting gaps per sequence

Assess alignment quality via dotplots

Dotplot with annotated sequences

Dotplot basics

Coevolution analysis

Phylogenetic Trees

Showing Bootstrap Support

Square Dendrogram Style

Radial Dendrogram Style

Using iplotx with cogent3

Circular Dendrogram Style

Angular Dendrogram Style