load_aligned_seqs¶

load_aligned_seqs(filename, format=None, array_align=True, moltype=None, label_to_name=None, parser_kw=None, info=None, **kw)¶

loads aligned sequences from file

Parameters

filenamestr: path to sequence file
formatstr: sequence file format, if not specified tries to guess from the path suffix
moltype: the moltype, eg DNA, PROTEIN, ‘dna’, ‘protein’
array_alignbool: if True, returns ArrayAlignment, otherwise an annotatable Alignment
label_to_name: function for converting original name into another name.
parser_kwdict: optional arguments for the parser

Returns