make_unaligned_seqs#
- make_unaligned_seqs(data, moltype=None, label_to_name=None, info=None, source=None, new_type=False, **kw)#
Initialize an unaligned collection of sequences.
- Parameters:
- data
sequences
- moltype
the moltype, eg DNA, PROTEIN, ‘dna’, ‘protein’
- label_to_name
function for converting original name into another name.
- info
a dict from which to make an info object
- source
origins of this data, defaults to ‘unknown’. Converted to a string and added to info[“source”].
- new_type
if True, the returned SequenceCollection will be of the new type, (cogent3.core.new_sequence.SequenceCollection). The default will be changed to True in 2024.12. Support for the old style will be removed as of 2025.6.
- **kw
other keyword arguments passed to SequenceCollection