alignment#

SequenceCollection(*, seqs_data, moltype[, ...])

A container of unaligned sequences.

AlignedSeqsData(*, gapped_seqs, names, alphabet)

The builtin cogent3 implementation of aligned sequences storage underlying an Alignment.

Aligned(data, moltype[, name, annotation_db])

A single sequence in an alignment.

Alignment(seqs_data[, slice_record])

A collection of aligned sequences.